Bioinformatics

Written from the session logs of 24 October, I’ll be going over it. Try it at huggingface.co/spaces/SoulFireMage/talk-to-a-cell, and the code is on GitHub as talk-to-a-cell. Last November I wrote up Cell2Cell, where a specialised single-cell model was running in LM Studio on my own GPU, speaking genes rather than English, and Claude acted as translator so I could actually use it. It worked first time, and was useful to me at least, but it needed my machine, my GPU and me sat there at it. This week it turned into something anyone can open in a browser. ...

Cell2Cell: Orchestrating Narrow AI with General AI Today’s work started at 8:45am - post finished (draft 1) at 9:05*. I have Gemma C2S, which is a specialized single-cell gene expression model running locally on my GPU. I can’t directly understand or use this model because it speaks in gene sequences, not English. However, I had the idea that Claude Code could, if I provided it with the HuggingFace guidance card. ...